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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797932.1_cds_XP_016457390.1_5073
CDS Infomation

[gene=LOC107781230] [db_xref=GeneID:107781230] [protein=LRR receptor-like serine/threonine-protein kinase EFR] [protein_id=XP_016457390.1] [location=join(1981..2935,3178..5090)] [gbkey=CDS]
Sequence

ATGACTTCAAAACACATATTTGTGAAGATACTTTTGCAAAGTGATATGGAGAAAGGTTGT
ATTCATCTTGCTCTTGGACTTTTGCTGCTTCAGCAAATGAATACTTGTTTGTCAATTGTT
AATATCACTACTGATCAAACAACACTTCTTGCCTTGCGATCTCAATTTTCTTTATACGAT
TCCCACCACCTCTTGACTAGAAACTGGTCCACTTTTACCCCTACTTGTAGTTGGATAGGA
GTTACTTGTGGCCCTCGCCACCAAAGAGTCACTGCCTTAAATCTTTCTAGTATGAACCTT
AAAGGAATGGTTCCACCACAACTTGGAAATCTCTCGTTTCTCATTTCCCTCGATATCAGA
AACAATAGCTTCTATGGGAATTTGCCAGAGGAGTTAGCTCGTTTGAGGAGATTGAAAATG
ATCAATGTCATGAATAACAACTTTACTGGTGCAATCCCATCATTTTTCGGCCTGTTACCA
AACCTCCATTCCCTGTACCTTTCATTTAACCAATTTTCGGGTAATATACCTACATCCCTT
TTTAATATAACAAAACTAAAGTATTTAAGACTACGAGGGAATTTTCTTGGTGGAGAAATT
CCTCAAGAAATCAGTAGACTCTGTTGCCTGACTTCCATAGACCTGCAGGATAATAAGCTT
ATAGGCTCTATACCACCAACTATGTTTAACCAGTCATCACTTAAACAGATTGGTCTAACA
AAGAACAATCTTTATGGGAAACTGCCTGGAAACATATGTGACAATCTTCCAAATTTAGAG
GCACTTGCGCTTTCAGGCAATCGGTTTGATGGCTTGATTCCTCCAAATTTGCAGAACTGC
TCAAAACTTCAAATATTATCATTGTCTCAAAATGATTTCACCGGAACCATACCAGCAGAA
ATCGGGAACTTAACTATGCTGACAGCACTGCAGCTTGGAGTTACCTACTTGAAAGGTGAA
ATACCAATGGAGATTGGATATCTTCAAAAGCTCCAAATATTCGGATTGTATCAAAATAGG
CTGAGTGGTTCAATTCCAGCAAGCATTTTCAACATTTCATCCCTCCAAATCTTGACCATT
GTGGATTGTCAGCTTTCAGGGAGTCTACCATTAAATGTAGGCCAAGGGACACCAAATCTG
CAAGAAATTTATTTGGGAATGAATAATCTCAGTGGCCTCTTCCCTTCTTCAATCTCTAAT
GCATCAAAACTCATTGCTCTAGACCTTTCAAACAACAGCTTTTCAGGCTCCATTCCTGAT
TCCCTAAGTAAGTTAGAATTCCTTCAACTTCTACAGTTAGGGCAAAACAAGTTGATCAAC
CAGAATCCCTCTTCAGAATTAACCTTCCTGACTTCACTTACAAGATGTCGAAATCTAAGA
GAACTGGTCATTGGTCCAAATCCCTTGAATGGCATTCTTCCGGCTTCTATTGGTAATTTC
TCGAGCTCTCTCAAAAGATTTTCTGCACCCGGGTGCAAACTCAGCGGCATTATACCAGAA
GAAATTGGAAACCTAACAAATGTGATTAGCATACTTCTATTTGTCAATGATTTGACAGGG
TTCATCCCCAAAACTGTTGGAGGTTTGCAGAAGCTTCAAAGGTTTCTTATACACAGTAAC
ATGATAAGTGGGACTATTCCAGATGAAATTTGCTCTTTACAAAATATTGGAGACCTAGGT
GTAGGGCAAAATAAAATTTCAGGTCCATTACCGTCGTGTTTGGGGAACCTTACTAGTTTG
AGAAATCTTTATTTAGCTTCCAACAGATTGAACTCCAGTTTACCTGAGAGCATGTGGAGC
CTTCAAGATCTATTGATACTTGATGCAGCATCAAATTCATTTTCTGGTGTTCTGTCTCCC
ATAATTGGAAATCTAAAGGCTATTACAAAAATTGAATTGTCATACAATGACTTTTCAGGC
ATGATTCCTAGCACGATGGGAGGTCTACAAAAAATGATTTATTTTTCTCTATCACACAAC
AGAATTGATGGCCCCATTCCAGTGTCTTTTGGGAAATTGTTAAGCTTGGAATTCTTGGAT
TTGAGTTATAACAATCTAACTGGTGAAATACCAAAGTCCTTAGAAGCTCTTGTGTACCTC
AGATACCTTAATGTTTCCTTCAATAAACTCAGCGGAGAAATTCCATCTGGTGGTCCTTTC
GCAAACTTCACCAATCAGTCTTTTGTGTCTAATCATGCATTATGTGGTGTATCAAGGCTC
CAAGTGCCACCATGTCAAGTCAAGTCTCCGCGAAGGGCGAGGAGAAAAAGAGTACTTTTC
TCGATCCTGTATAGTCTTTTGGGAATAACATCAGTATTTGTTGCATTAGCCGTTGGATTT
CTTATTTTAAGAAGAAGAAATAGAAATGAACCATCAGGATTAACTGATCAGGTATCATCC
ATGAGGGCCTACGAAAGAGTTTCGTATTATGAACTTCAACAAGCAACAAATGGATTCAGC
GCGGACAATTTGCTTGGTATTGGGAGTTTTAGCAAGGTGTACAAAGGGGTAAAGGACGGG
ATGACATTCGCAGTAAAGGTATTCAAACTGGAACATGAAGGTGCATTCAAGAGCTTTGAA
ACAGAATGTGAGATCTTACGCAACCTTCGCCATAGGAACCTGACCAAAGTCATAACTTCT
TGTTCCCACTCTAAGTTCAAGGCCTTAATATTAGAGTACATGCCAAATGGCACCCTAGAC
AAATGGTTACACTCTCATGACTTATTCTTAGACATGTTGCATAGGTTGGACATAATGGTA
GATGTAGCATCTGCCTTGGACTATCTCCATAACGGTAATTCAGAGCCAGTGGTGCATTGT
GATTTGAAGCCTAGCANAATTCAGAGCCAGTGGTGCATTGTGATTTAA

Peptide Sequence

PEP ID

XP_016457390.1
PEP Infomation

PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Nicotiana tabacum]
Sequence

MTSKHIFVKILLQSDMEKGCIHLALGLLLLQQMNTCLSIVNITTDQTTLLALRSQFSLYD
SHHLLTRNWSTFTPTCSWIGVTCGPRHQRVTALNLSSMNLKGMVPPQLGNLSFLISLDIR
NNSFYGNLPEELARLRRLKMINVMNNNFTGAIPSFFGLLPNLHSLYLSFNQFSGNIPTSL
FNITKLKYLRLRGNFLGGEIPQEISRLCCLTSIDLQDNKLIGSIPPTMFNQSSLKQIGLT
KNNLYGKLPGNICDNLPNLEALALSGNRFDGLIPPNLQNCSKLQILSLSQNDFTGTIPAE
IGNLTMLTALQLGVTYLKGEIPMEIGYLQKLQIFGLYQNRLSGSIPASIFNISSLQILTI
VDCQLSGSLPLNVGQGTPNLQEIYLGMNNLSGLFPSSISNASKLIALDLSNNSFSGSIPD
SLSKLEFLQLLQLGQNKLINQNPSSELTFLTSLTRCRNLRELVIGPNPLNGILPASIGNF
SSSLKRFSAPGCKLSGIIPEEIGNLTNVISILLFVNDLTGFIPKTVGGLQKLQRFLIHSN
MISGTIPDEICSLQNIGDLGVGQNKISGPLPSCLGNLTSLRNLYLASNRLNSSLPESMWS
LQDLLILDAASNSFSGVLSPIIGNLKAITKIELSYNDFSGMIPSTMGGLQKMIYFSLSHN
RIDGPIPVSFGKLLSLEFLDLSYNNLTGEIPKSLEALVYLRYLNVSFNKLSGEIPSGGPF
ANFTNQSFVSNHALCGVSRLQVPPCQVKSPRRARRKRVLFSILYSLLGITSVFVALAVGF
LILRRRNRNEPSGLTDQVSSMRAYERVSYYELQQATNGFSADNLLGIGSFSKVYKGVKDG
MTFAVKVFKLEHEGAFKSFETECEILRNLRHRNLTKVITSCSHSKFKALILEYMPNGTLD
KWLHSHDLFLDMLHRLDIMVDVASALDYLHNGNSEPVVHCDLKPSXIQSQWCIVI

Transcript Sequence

Gene sequence data has not been registered.